If your peak has suddenly disappeared, check to make certain that your detector still has good sensistivity for other trace gases, and the correct sampling loop size with flows working OK.
Conditioning depends on the column maximum operating temperature, and whether any other columns are in the oven. For PLOT fused silcia columns, they usually have a maximum of about 190C.
I prefer to condition a plot column overnight at 190C with helium, but the really important aspect is to make sure that you maintain at least a low flow continuously after conditioning. If you have a packed column in stainless steel you can go up to 265C, but you should follow the manufacturer's recommendations.
The other aspect is to ensure that your carrier gas purifiers are all functioning correctly, and the carrier gas is pure. Make certain all your detector makeup and reference gases are also pure.
Bruce Hamilton