You can go with the typical methods with methanolic NaOH, and BF3/methanol I believe Consumer Products Guy has a simple procedure with that.
I do some Fames work only very sparsely and most of the reagents, especially BF3/methanol have limited shelf life as they degrade and form water poisoning the reaction. I mainly just need a relative amount C16 C18 C18:1 C18:2 to identify an oil so I wound up using a standard wax column and some prepared methanol NaOH (not fully dry) then, aqueous HCl to acidify, then isooctane to extract and methyl chloroformate for esterfication.
Another method that looks promising is mild methanolysis. This link has the method as well as several standard ones.
http://www.jlr.org/content/51/3/635.full.pdf+html
As for column ramps and flow you can just pick a method and use Agilent's method translator for your column dimmensions and carrier gas.