My boss, who has been using these HP/Agilent systems since they were introduced, and who has been teaching HPLC and LC/MS for decades, suggests that for most NP HPLC applications, you can use the factory RP seals, not the 'special' NP seals. The NP seals wear out very fast. The NP seals can only be used at pressures of less than 200 bars. The RP seals will work fine, up to max pressure, even with solvents such as Hexane and Heptane. You may hear additional noise with them when running very dry solvents (i.e. Hex and Heptane), but the sound can be made to go away by periodically washing down the flow path with some IPA. Note: as with all seals, use of strong acids, strong bases, buffers may result in excessive wear or damage so regular inspections/tests should always be done.
If you have the NP seals installed and want to run RP methods, then you can do this, but are limited by pressure (max), reduced lifetime and should just swith over to use RP seals.
Aside from the initial seal break-in that you should do at installation (important to do with all seals, as well as run the pressure tightness and leaks tests anytime you replace seals or pistons), otherwise no break-in is needed. After evaluating the NP seals year ago for these purposes, he found that the FACTORY RP seals are far better and last longer. He has run thousands of NP methods this way with no problems and is what he teaches in class and provides as advice to clients.