Advertisement

Air/Water response Clarus500

Discussions about GC-MS, LC-MS, LC-FTIR, and other "coupled" analytical techniques.

6 posts Page 1 of 1
Hi,

I have to start an GC/MS Clarus 500 which was in stand by for more 2 years.
All seems ok (He flow, Oven, Pump...) but I have a problem in the Water/Air leak leak control.

I obtain those peaks: https://www.dropbox.com/sh/a5m23b9bq64q ... rofile.bmp

The ratio of the peaks He, H2O, N2 and O2 is good so there are no leaks but what are the peaks at m/z= 14 , 16 and 17, are they contaminants ?

They shouldn't be there according to the installation manual and I should obtain that:
https://www.dropbox.com/sh/a5m23b9bq64q ... normal.bmp

Thank you for your help.
Well done for getting a 2 year system up and running.

I would give the source a clean to start. Check the higher masses perhaps with the calibration valve open to see if that matches the manual, you may some some issues with oil.
I have made the Autotune then a calibration of the system with the FC43 heptacosa and the peaks match with the manual and the peaks at 14, 16 and 17 disappeared but now I have a new problem!!!

The peaks of Helium and those of H2O are too small beside the O2 and N2 peaks:
https://www.dropbox.com/sh/a5m23b9bq64q ... le%201.bmp

The manual says that it could be due to a leak but I checked all connection (column and pump) and all seems OK!!

Do you think I can fix the problem on my own or it's better to call Perkin support ?
Anyone more experienced please correct me if i'm wrong, but isn't it very clear that there's a leak? At my previous job, i used the same instrument with N2/O2 peaks as large as that - got the job done but spectra would surely have looked better if we had fixed it. A leak doesen't have to be at the column or pump - air might also get mixed in to the carrier gas even before entering the column. Also, there are a number of places in there that could leak - all the connections between the reference gas vial and vacuum chamber, pirani & penning gauge, (plugged) CI gas port, PMT port, transfer line port and of course the source, although i guess that leaks in some of those places wouldn't cause air peaks but only a bad vacuum. Leaks at the reference gas connection will, however, give huge air peaks - been there, done that, so to say. :roll:
I would check the seal that is made between the atmosphere and the vacuum chamber. I only have experience with Agilent systems but I always put a very thin film of apiezon grease (http://www.apiezon.com/products/vacuum-greases/l-grease) on the gasket before I close it after maintenance. That might help you a little.

I have recently found some tanks of helium containing higher-than-normal concentrations of N2. Are you driving your helium through an oxygen scrubber? Make sure that the trace air is not in the carrier gas.
Thank you for your help,

I have cleaned the source and I have checked connections between cloumn and injector and column and ms and now the problem seems to be fixed, I have the normal air/water/helium response.
6 posts Page 1 of 1

Who is online

In total there are 30 users online :: 1 registered, 0 hidden and 29 guests (based on users active over the past 5 minutes)
Most users ever online was 5108 on Wed Nov 05, 2025 8:51 pm

Users browsing this forum: Amazon [Bot] and 29 guests

Latest Blog Posts from Separation Science

Separation Science offers free learning from the experts covering methods, applications, webinars, eSeminars, videos, tutorials for users of liquid chromatography, gas chromatography, mass spectrometry, sample preparation and related analytical techniques.

Subscribe to our eNewsletter with daily, weekly or monthly updates: Food & Beverage, Environmental, (Bio)Pharmaceutical, Bioclinical, Liquid Chromatography, Gas Chromatography and Mass Spectrometry.

Liquid Chromatography

Gas Chromatography

Mass Spectrometry