I would throughly clean the inlet, including swabbing it out with solvent. The phthalates have probably migrated along surfaces over the past ten years. Unless someone kept the instrument under carrier flow for the past the years, the column has been exposed to air - and may be the source of the siloxanes as a result of degredation. If thecolumn has begun to degrade, it will only continue to degrade.
How was the instrument prepared for storage? If gas lines were capped off with metal caps, good. If wrapped with plastic tape, there could be phthalates in the gas lines from migration from plastics.
Places that are likely to have been contaminated are best stripped with solvent, if possible. Then, with carrier flow on, see if the flow of gas will carry away remaining contamination. Phthalates moving to the column are not a problem for the column - they elute. They are a problem if they are in the plumbing ahead of the column becuase they migrate and accumulate on the head of the column between runs.