If you're using only increased temperature on your column (40 degrees), and you did't heat the analyses before injection, I would'n say that the improvement in peak shape is due to the degradation on higher temperature.
Why?
The compounds in the column during the separation are bonded with the stationary phase. In that kind of conditions even temparature sensitive compounds don't undergo degradation (because they are most of the time bonded by different intermollecular forces to the stationary phase)
Let us presume that a degradation really had occured. Wouldn't we expect to find unknown peaks in the chromatogram, peaks of those degradation products?
Zoran
Nice theory. The mobile phase contains TFA. If acidic degradation of the main peak occurs as the product travels along the column, the impurity peak will be less resolved the further through column the main peak travels. Increasing the temperature will promote degradation.
The consequences of on-column degradation could be:-
- The impurity doesn't elute, so main peak just gets smaller.
- The impurity elutes on or near the main peak, so the main peak smears.
- The initially-resolved impurity will smear towards the main peak, but impurity peak height won't change. The main peak height can change, and will smear towards the impurity.
I'm sure there are other scenarios, but if you put a sample into an environment of 0.1% TFA, you should always consider the possibility of degradation.
Bruce Hamilton