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Problems using AMDIS with MassBank data

Posted: Thu Apr 30, 2015 11:41 am
by InjectionPulse
Hello guys (and girls),

i tried using AMDIS with Massbank Data by downloading the data and converting it to a *.MSP library.
After trying to analyse my MS signal using this database i get the error "Too many library peaks". The library consists of about 34000 spectra.

Maybe i dont know how to use AMDIS correct but i cannot find a good documentation.

Best Regards

Re: Problems using AMDIS with MassBank data

Posted: Tue Jun 23, 2015 2:31 pm
by bruninan
I'm having the same issue. Were you able to figure out what the problem was?

Re: Problems using AMDIS with MassBank data

Posted: Wed Jun 24, 2015 4:28 am
by chemstation
Which version of AMDIS are you running, try the lastest version,

Alternatively use Lib2NIST.exe, and covert to a NIST Library. This NIST library
can then be selected in AMDIS under Analyze, Select NIST libraries, then using the "Select..." button
find your recently created NIST library.

Alex