Bill,
I was trying not to say too much. I was trying to address the issue of transferring results from one instrument to another. Most all the other things, thermodynamics, etc. transfer easily. Your advise of using a special reference electrode is good because not only does it eliminate clogging, it eliminates the one variable to data transfer. That is junction potential. The bridging solution in many reference electrodes is KCl for the good reason that K+ and Cl- have very similar diffusion and transport rates in aqueous media. That minimizes junction potential and its thermal coefficient, so you can ignore the issue in most applications. In non-aqueous systems, the junction potential is no longer minimized. There are for instance double-junction electrodes where the bridging solution is KNO3, that will behave a bit differently than single-junction electrodes bridged with KCl. As long as you use a reference electrode with a consistent bridging solution, the offset will transfer from one instrument to another.
Fortunately, the effect is small, and the cure is easy.