by
fandaga » Mon Mar 07, 2011 1:49 pm
I only have experience with Agilent and Waters HPLC & UHPLC systems, but I don't think you can go wrong with either as far as the quality of instrument. I'm pretty sure both UHPLC systems can be configured to accept the well plates you need to use. As far as price, the Waters UPLC is cheaper than Agilent's 1290 system, and the Waters software has a bit of a leg up on Agilent's in terms of GMP compliance and flexibility. On the opposite side, I've found the 1290 UV/vis detector to be considerably more sensitive than Waters'. In addition, I've compared both vendor's single quad MS detectors when interfaced with each system, and again they're very similar (highly sensitive, fast scanning rates for UPLC peaks, broad LDR). As far as ease of use, I like Agilent's 6140 MSD slightly better.
Lastly, I also agree with the previous poster's comments. I wouldn't purchase any system until you get a demo unit from each vendor.