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Alternative mass spec quantitation software?

Posted: Fri Aug 02, 2024 2:59 pm
by bisnettrj2
I'm currently using MassHunter on my Agilent systems, and Sciex OS on my 6500+. And I really, really dislike the reporting options and workflow on my Sciex OS software. I find MassHunter to be much more user-friendly for the pesticide residue work I perform.

My question - is there a stand-alone quantitation software package out there that is designed for environmental/pesticide residue analysis using data from ANY mass spec acquisition file? I know the answer is probably no, but I would love to be able to quant like MassHunter with my Sciex data, so any help would be appreciated.

Re: Alternative mass spec quantitation software?

Posted: Fri Aug 02, 2024 4:06 pm
by sbashkyrtsev
What kind of quantification do you need for the environmental/pesticide workflows?

We've built Peaksel both for processing/quantification and storage. But it doesn't support Sciex yet - most likely coming this autumn. MassHunter isn't a problem though.

Also, I see that OpenChrom has some support. Maybe it's a viable option.