AFAIK, the E2M2 is no longer made and the RV3 is its defacto replacement, although in almost every way the RV3 is a better spec pump.
I use to buy rebuild kits from Capitol Vacuum in Chantilly, VA. The last time I bought one was in 2020. Unfortunately, when I went looking back before Christmas, it seems as though they are no longer around or at least not in that business-it's a shame as they had a pretty complete catalog and were very reasonable.
Edwards does sell kits and individual parts for their pumps, but they are pricey. In fact I remember at my last job going round and round with our ordering guy(who liked to spend more time second guessing peoples orders than just trusting the science staff to order the right thing). I'd ordered a major rebuild kit including vanes for an E2M1.5 from CapVac for about $200, and he tried to argue with me that the $150 kit from Edwards(which was just a seal kit) for $150 was the same...
I don't have any great current leads I've actually dealt with on aftermarket rebuilt kit suppliers, but a quick search led me here
https://www.precisionplus.com/Brands/Va ... 700212242I
Remember that Agilent pumps are one of the "pieces" they kept basically intact from the Varian acquisition, and as best as I can tell the rough pumps they sell now are no differnt from their Varian precursors other than having the Agilent name slapped on them. I've spoken often on here of my love of the Varian DS102. At my last job, I ran those pumps a lot. Varian Saturn 2000 ion traps were once a very popular budget GC-MS(I fought with one for years on and off at my last job, and shortly before I left I bothered to learn a bit more about it, kept it in service, and actually really loved it even though it certainly had its quirks). The DS102 was the standard pump supplied with a lot of Varian GC-MSs, including the Saturns and even the big 1200/300 Triple Quads(phenomenal mass specs...) so I always had a bunch around. The one I'm running now actually is Agilent branded, but I still call it a Varian pump
Do you know the model number on the pump from your LC-MS? Between atmospheric pressure ionization and the "intermediate" vac area, LC-MSs often have big backing pumps. The last I did much with was a Finnigan LCQ Duo, and even after I gave up on it(a story for another day...) I kept its Edwards E2M8 pump, a massive 220V job. Depending on what model pump you have, it may be possible to bypass the control electronics.
With all of that said, too, don't discount some strange things happening using a pump that big.I can't tell you where exactly I saw this, but I seem to remember in a 5973 manual seeing that you could trip errors if the foreline pressure fell too low(maybe 5mTorr? Maybe lower than that? I know I've seen 7mTorr on a 5975 with a DS102 and blank ferrule and it was fine). Of course on a turbo instrument I have no idea how the instrument would know it was too low since Agilent, in their infinite wisdom, doesn't see fit to put foreline gauges on turbos. That's actually on my to-do list to see if I can figure out how to do that, although I've had bigger things to worry about.
Of course the other side of that too is that past a certain point, a bigger backing pump won't necessarily decrease pressure. In some cases on diff pump 73s/75s with a blank ferrule(best case scenario for vacuum) I've seen order of magnitude improvements in hi-vac when going from a stock pump to an RV3 class pump(again, check the spec sheets, the DS102 and RV3 are essentially interchangeable). The larger pump does improve vacuums with analytical column flows, and IME with larger pumps you can keep acceptable vac levels with higher column flows than Agilent specs. IIRC I was able to do 2mL/min(helium) in the past with a 5975 diff pump with an RV3 where Agilent says 1.5ml max. That was when someone came to me and just had to run a .530mm column(pretty much the opposite of where I like to go on GC-MS, where I'll run .2 or even .18mm if I can get away with it).
And sorry for my 5:00AM, been awake since 2:00AM with a 1 year old who won't sleep unless I'm holding him, not enough coffee yet rambling.