Actually I had the SAME issues with peak areas when I tried the mobile phase as well as aqueous diluent. IPA has the perfect polarity to dissolve this sample and my validation run is complete and has passed everything.
Also we only use high purity IPA, MeOH and ACN here and I am well aware of the hygroscopic properties of these as I had to monitor water content of MeOH every day at my previous job.
I'm kinda having the same issue myself , the technician came over and discovered that the top of the vials were wet after an injection ensued which led him to believe that there was something wrong with the injection valve . He replaced the valve and it worked for a day and then the problem manifested itself once again. Perhaps it wasn't an injection valve issue - where the flow isn't diverted when making the injections - so he placed an empty vial and made an injection on the spot where he discovered that it hadn't become wet. Today , he replaced the seal pack and injection needle and the areas returned , in a ball park sense , to normal values ... there was variance .... plan to clean out the column today and test it tommorrow with repeat injections of a standard.