http://www.chem.agilent.com/Library/use ... -90020.pdf
Here is a tutorial that may help you, I have limited experience with LVI/MMI. I've worked on systems that had it, but haven't run a lot of samples myself or anything. The ALS does have different injection speeds, but the speeds are limited to just slow/fast/faster I think. It supports up to 1 mL so 50 uL shouldn't be too tough.
If you already have the hardware I would just start by experimenting with very clean test samples. Figure out the setup and running the software with something easy. Use Agilent's test method and if you have any problems like the sample getting up into the lines it would pretty much be pure solvent and easily removed.
http://alexandria.tue.nl/repository/fre ... 617570.pdf
This paper references liners that contain a more solid frit or a cup to capture the liquid, could be helpful. Although I would think the standard split liner with wool would have enough surface to capture 50 uL, and it has a small glass bump on the bottom that gives it a bit more room above the gold seal in order to accommodate more flow.