I agree with dblux. You are lean on fuel. Agilent FID's generally operate best with the Air:H2 at 10:1. Try making your H2 flow at 45 mL/min and see if you get a better flame.
I generally operate more like 300:30 or 350:35. When the detectors work at these flows, I don't understand why I should blow through more air and hydrogen. Noise is pretty much the same on all of my systems.
I changed the Air/H2 flow to 300:30, the unit wouldn't stay lit. So I raised it to 450:45, Bingo!
The FID immediately lit with a strong pop, the output signal jumped to 4.5pA, and recovery jumped up about 25%. I'm wondering if the repeat ability problem I was having was due to incomplete combustion rather than a failing column.
I still need to double check the flows with a meter (our department partners have a flow meter but they are moving, and I can't borrow it right now).
For now I'll calibrate and go from there.
Thanks everyone for the useful tips.