Ghost peaks & bad chromatography

Discussions about GC-MS, LC-MS, LC-FTIR, and other "coupled" analytical techniques.

2 posts Page 1 of 1
Hi,

During the method development process, I have been getting a weird ghost peak at the beginning of every sample injection. It's happening under various conditions, both gradients and isocratic, and different columns.

Below are some chromatograms - isocratic 50% B with a zorbax column, isocratic 50% B with an acquity column, and a 0-100% B gradient over 1 minute with a zorbax column.

The same ghost peak appears in all of them, and the chromatography is generally messy with a lot of noise or slowly-eluting analyte after the main peak.

Mobile phase A: 0.1% formic acid in water
Mobile phase B: 0.1% formic acid in acetonitrile
Flow rate: 0.5mL/min
Column temperature: 60°C
LC: Shimadzu Prominence LC20-ad XR
MS: Sciex API 4000 QQQ

I recently tuned this compound via syringe infusion. Could the source be contaminated or may there be other reasons for this? Thank you for any suggestions.

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Imgur link (the images wouldn't embed properly): https://imgur.com/a/PJX0D4O
Is this the situation that would occur if the injection valve is contaminated with the tune compound; each time that the valve switches, some amount of the contaminant is flushed onto the column.
2 posts Page 1 of 1

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